Basic Information
Locus ID:
CQ.Regalona.r1.2AG0012360
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 44773055 | 44778765 | + | CQ.Regalona.r1.2AG0012360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 92,069.48 Da | 53.57 | 75.06 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 496 | 755 | 1.03762E-84 | - |
| CDD | cd01989 | STK_N | 32 | 195 | 3.87517E-55 | - |
| Pfam | PF00069 | Protein kinase domain | 492 | 749 | 1.7E-37 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 32 | 159 | 3.2E-10 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 32 | 159 | 1.34E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 473 | 751 | 1.28E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 765 | 1.8E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 31 | 168 | 6.1E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 455 | 562 | 1.4E-25 | - |
| SMART | SM00220 | serkin_6 | 490 | 752 | 2.1E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 490 | 756 | 34.138569 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 608 | 620 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 818 | - | - |
| Coils | Coil | Coil | 356 | 376 | - | - |
| Coils | Coil | Coil | 416 | 471 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021744487.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LZ29 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology