Basic Information
Locus ID:
CQ.Regalona.r1.2AG0011330
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 42107656 | 42114578 | - | CQ.Regalona.r1.2AG0011330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 31,962.67 Da | 42.82 | 90.25 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 48 | 276 | 7.6E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 44 | 277 | 1.03E-49 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 36 | 98 | 9.7E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 278 | 6.6E-35 | - |
| SMART | SM00220 | serkin_6 | 47 | 279 | 1.5E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 283 | 28.287094 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 77 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54610.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021739661.1 | interferon-induced, double-stranded RNA-activated protein kinase-like [Chenopodium quinoa] | 0 |
| Q8SSH1 | Probable serine/threonine-protein kinase ECU02_0550 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=ECU02_0550 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5E4E795 | PREDICTED: eIF-2-alpha kinase GCN2 OS=Prunus dulcis OX=3755 GN=ALMOND_2B024278 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_5174, gene_6300, gene_8947 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2AG0011330 |
| Apiaceae | Apium graveolens | 1 | Ag10G00818 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0137s00011.v1.0, Dusal.0200s00004.v1.0 |