Basic Information
Locus ID:
CQ.Regalona.r1.2AG0010070
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 26033678 | 26036741 | + | CQ.Regalona.r1.2AG0010070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 62,973.39 Da | 38.91 | 104.03 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 46 | 5.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 75 | 6.15E-11 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 149 | 357 | 1.73E-15 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 50 | 1.1E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 271 | 360 | 1.1E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 262 | 2.0E-5 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 47 | 9.179537 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59200.2 | - | 0 |
| RefSeq | XP_021771561.1 | F-box/FBD/LRR-repeat protein At1g78750-like [Chenopodium quinoa] | 0 |
| Q9LX51 | F-box/LRR-repeat protein At3g59200 OS=Arabidopsis thaliana OX=3702 GN=At3g59200 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N072 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology