Basic Information
Locus ID:
CQ.Regalona.r1.2AG0009740
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 25030796 | 25032875 | - | CQ.Regalona.r1.2AG0009740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 24,273.73 Da | 46.40 | 92.90 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00071 | Ras family | 3 | 58 | 4.2E-10 | IPR001806 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 110 | 195 | 1.8E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 204 | 2.31E-24 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 3 | 59 | 1.05E-10 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 84 | 1.2E-9 | IPR027417 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 85 | 182 | 3.4E-27 | - |
| SMART | SM00175 | rab_sub_5 | 3 | 139 | 0.0053 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 107 | 217 | 14.336837 | IPR000719 |
| ProSiteProfiles | PS51419 | small GTPase Rab1 family profile. | 1 | 214 | 11.473659 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54590.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021763959.1 | calcium/calmodulin-regulated receptor-like kinase 1 [Chenopodium quinoa] | 0 |
| Q9FIU5 | Calcium/calmodulin-regulated receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRLK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MH08 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16728, jg29538 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000009421, gene:ENSEOMG00000042156 |
| Amaranthaceae | Chenopodium quinoa | 16 | CQ.Regalona.r1.2AG0008970, CQ.Regalona.r1.2AG0009740 ... |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G011020 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2329 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2495 |
| Poaceae | Oryza coarctata | 1 | Oco11G007370 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG20.18 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12421, nbisL1-mrna-17488 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018876 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-24574 |
| Salicaceae | Populus euphratica | 1 | populus_peu25094 |