Basic Information
Locus ID:
CQ.Regalona.r1.2AG0009230
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cmgc rck mak protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 21955348 | 21957262 | - | CQ.Regalona.r1.2AG0009230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 8,876.07 Da | 45.19 | 76.58 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 5 | 51 | 2.3E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 53 | 9.95E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 5 | 53 | 2.5E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 79 | 10.520657 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13020.7 | - | 0 |
| RefSeq | XP_021741262.1 | serine/threonine-protein kinase MHK-like [Chenopodium quinoa] | 0 |
| Q84SN3 | Cyclin-dependent kinase F-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KQ44 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg27005, jg8067 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2AG0009230 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G01595.1 |
| Brassicaceae | Brassica nigra | 1 | BniB05g044810.2N |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0049s00032.v1.0 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.997 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g31220.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr10G010440 |
| Poaceae | Zea mays | 1 | Zm00001eb136600_P001 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc07g05210, gene.Posoc07g05220 |