Basic Information
Locus ID:
CQ.Regalona.r1.2AG0006740
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 11668918 | 11673009 | - | CQ.Regalona.r1.2AG0006740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 52,786.39 Da | 56.91 | 55.11 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 373 | 430 | 3.5E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 205 | 261 | 1.5E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 364 | 432 | 9.29E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 202 | 263 | 1.83E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 198 | 264 | 1.6E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 357 | 433 | 8.8E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 372 | 431 | 4.5E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 204 | 262 | 4.5E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 199 | 263 | 24.454958 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 367 | 432 | 37.676926 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 27 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021770867.1 | probable WRKY transcription factor 4 [Chenopodium quinoa] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LSC9 | WRKY domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology