halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.2AG0004950

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Short Name: CBL1

Description: calcineurin b-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2A	7081311	7088551	-	CQ.Regalona.r1.2AG0004950

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.68	32,408.58 Da	38.23	99.73	0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF47473	EF-hand	229	284	1.97E-12	IPR011992
Gene3D	G3DSA:1.10.238.10	-	189	289	1.2E-15	-
ProSiteProfiles	PS50222	EF-hand calcium-binding domain profile.	231	258	9.492233	IPR002048

Gene Ontology

Molecular Function:

GO:0005509 (calcium ion binding)

KEGG Pathway

KO Term:

K06268 (serine/threonine-protein phosphatase 2B regulatory subunit)

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) ko04020 (Calcium signaling pathway) map04020 (Calcium signaling pathway) ko04022 (cGMP-PKG signaling pathway) map04022 (cGMP-PKG signaling pathway) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04218 (Cellular senescence) map04218 (Cellular senescence) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway) ko04370 (VEGF signaling pathway) map04370 (VEGF signaling pathway) map04650 (Natural killer cell mediated cytotoxicity) map04658 (Th1 and Th2 cell differentiation) map04659 (Th17 cell differentiation) map04660 (T cell receptor signaling pathway) map04662 (B cell receptor signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G17615.2	calcineurin B-like protein 1. Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation.
RefSeq	XP_021765765.1	calcineurin B-like protein 1 [Chenopodium quinoa]
Swiss-Prot	O81445	Calcineurin B-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CBL1 PE=1 SV=3
TrEMBL	A0A803MVX7	Calcineurin B-like protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.2AG0004950, CQ.Regalona.r1.7AG0018440 ... CQ.Regalona.r1.9AG0008010
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-21483