halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.2AG0002730

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description: membrane protein At1g06890-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2A	3561474	3571186	-	CQ.Regalona.r1.2AG0002730

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.38	36,337.46 Da	28.89	118.74	0.64

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03151	Triose-phosphate Transporter family	22	295	4.8E-19	IPR004853
SUPERFAMILY	SSF103481	Multidrug resistance efflux transporter EmrE	199	295	1.7E-6	-
MobiDBLite	mobidb-lite	consensus disorder prediction	307	334	-	-

KEGG Pathway

KO Term:

K15285 (solute carrier family 35, member E3)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G06890.4	-
RefSeq	XP_021737947.1	UDP-xylose transporter 3-like [Chenopodium quinoa]
Swiss-Prot	Q8RXL8	UDP-xylose transporter 3 OS=Arabidopsis thaliana OX=3702 GN=UXT3 PE=1 SV=1
TrEMBL	A0A803MJP3	TPT domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg10074, jg16553, jg16714, jg34088, jg38054, jg8250
Aizoaceae	Mesembryanthemum crystallinum	3	gene_17083, gene_20823, gene_7087
Amaranthaceae	Atriplex hortensis	3	Ah028197, Ah032080, Ah037923
Amaranthaceae	Beta vulgaris	3	BVRB_2g042710, BVRB_7g175770, BVRB_9g205250
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg2610, Sbi_jg26900, Sbi_jg30148, Sbi_jg33665 ... Sbi_jg43594, Sbi_jg60077
Amaranthaceae	Salicornia europaea	3	Seu_jg18309, Seu_jg24261, Seu_jg8365
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00003000, GOSA_00004068, GOSA_00015883
Amaranthaceae	Suaeda glauca	6	Sgl66056, Sgl70372, Sgl73210, Sgl76621, Sgl78493, Sgl80989
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000005392, gene:ENSEOMG00000013465 ... gene:ENSEOMG00000018604, gene:ENSEOMG00000022716, gene:ENSEOMG00000036490, gene:ENSEOMG00000039276, gene:ENSEOMG00000051737, gene:ENSEOMG00000051811
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2AG0002730, CQ.Regalona.r1.2BG0003920 ... CQ.Regalona.r1.7AG0001200, CQ.Regalona.r1.9AG0004470, CQ.Regalona.r1.9BG0004470, CQ.Regalona.r1.9BG0017770
Anacardiaceae	Pistacia vera	2	pistato.v30058490, pistato.v30268340
Apiaceae	Apium graveolens	4	Ag11G03446, Ag2G00969, Ag3G02199, Ag7G00126
Arecaceae	Cocos nucifera	4	COCNU_04G004450, COCNU_04G012720, COCNU_07G000310 ... COCNU_10G000340
Arecaceae	Phoenix dactylifera	6	gene-LOC103702123, gene-LOC103703958, gene-LOC103708422 ... gene-LOC103708886, gene-LOC103713422, gene-LOC103720405
Asparagaceae	Asparagus officinalis	3	AsparagusV1_02.352.V1.1, AsparagusV1_04.34.V1.1 ... AsparagusV1_07.552.V1.1
Asteraceae	Flaveria trinervia	3	Ftri10G29443, Ftri17G00667, Ftri6G27210
Brassicaceae	Arabidopsis thaliana	3	AT1G06890.1, AT2G28315.1, AT2G30460.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10008030m.g.v1.0, Thhalv10016866m.g.v1.0 ... Thhalv10016887m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp1g05600.v2.2
Brassicaceae	Brassica nigra	5	BniB01g015670.2N, BniB02g003080.2N, BniB03g001980.2N ... BniB06g017170.2N, BniB06g043830.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G0038, Ceq08G1691, Ceq08G2432
Casuarinaceae	Casuarina glauca	4	Cgl02G0041, Cgl08G1732, Cgl08G2654, Cgl08G2669
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno03g06220, gene.Cymno04g14990
Dunaliellaceae	Dunaliella salina	4	Dusal.0195s00010.v1.0, Dusal.0290s00016.v1.0 ... Dusal.0405s00003.v1.0, Dusal.0405s00005.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g05580, gene.Thate01g31450
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-553
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.561, evm.TU.LG09.898
Plantaginaceae	Plantago ovata	2	Pov_00014606, Pov_00040648
Plumbaginaceae	Limonium bicolor	3	Lb0G38368, Lb1G02477, Lb1G02482
Poaceae	Echinochloa crus-galli	14	AH01.1741, AH02.529, AH05.1105, AH07.2674, AH09.1596 ... BH01.2062, BH02.546, BH05.1162, BH07.2501, BH09.1789, CH02.608, CH05.1304, CH07.2564, CH09.1919
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0010940, gene-QOZ80_1BG0059490 ... gene-QOZ80_2AG0128080, gene-QOZ80_2AG0138050, gene-QOZ80_2BG0183510, gene-QOZ80_2BG0193740, gene-QOZ80_4AG0310370, gene-QOZ80_4BG0341570, gene-QOZ80_5AG0403400, gene-QOZ80_5BG0451770
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0025990.1, HORVU.MOREX.r3.1HG0043600.1 ... HORVU.MOREX.r3.2HG0182210.2, HORVU.MOREX.r3.3HG0234660.1
Poaceae	Lolium multiflorum	6	gene-QYE76_009799, gene-QYE76_011522, gene-QYE76_023804 ... gene-QYE76_045089, gene-QYE76_045091, gene-QYE76_050025
Poaceae	Oryza coarctata	12	Oco01G002580, Oco01G023580, Oco02G002630, Oco02G024340 ... Oco03G015880, Oco04G016500, Oco09G003230, Oco10G003190, Oco11G010050, Oco12G010000, Oco19G006210, Oco20G006160
Poaceae	Oryza sativa	6	LOC_Os01g07310.1, LOC_Os01g60780.1, LOC_Os02g41780.1 ... LOC_Os05g07670.1, LOC_Os06g30950.1, LOC_Os10g33920.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G201500, gene-BS78_03G053100 ... gene-BS78_06G161000, gene-BS78_09G065900
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0200430, Pt_Chr0204122, Pt_Chr0207443, Pt_Chr0302065 ... Pt_Chr0306747, Pt_Chr0501710, Pt_Chr0501750, Pt_Chr0502600
Poaceae	Sporobolus alterniflorus	20	Chr01G011730, Chr02G019340, Chr03G004850, Chr05G010330 ... Chr06G007120, Chr06G012720, Chr08G000110, Chr09G011350, Chr09G025490, Chr0G009550, Chr12G024950, Chr13G006990, Chr13G013890, Chr15G015800, Chr18G000280, Chr22G014360, Chr23G008670, Chr25G007080, Chr26G011070, Chr30G007000
Poaceae	Thinopyrum elongatum	4	Tel1E01G209000, Tel1E01G288500, Tel2E01G654100 ... Tel3E01G169800
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG014500, gene_TRIDC1AG023830 ... gene_TRIDC1BG019550, gene_TRIDC1BG028850, gene_TRIDC2AG054940, gene_TRIDC2BG057690, gene_TRIDC3AG011720, gene_TRIDC3BG015720
Poaceae	Triticum aestivum	12	TraesCS1A02G112100.2, TraesCS1A02G156400.1 ... TraesCS1B02G132400.3, TraesCS1B02G173400.1, TraesCS1D02G113700.2, TraesCS1D02G154900.1, TraesCS2A02G380500.1, TraesCS2B02G397500.1, TraesCS2D02G376800.1, TraesCS3A02G097100.2, TraesCS3B02G112800.1, TraesCS3D02G097600.2
Poaceae	Zea mays	9	Zm00001eb045670_P001, Zm00001eb077180_P002 ... Zm00001eb123260_P001, Zm00001eb221640_P001, Zm00001eb247710_P001, Zm00001eb281960_P001, Zm00001eb336390_P001, Zm00001eb345900_P001, Zm00001eb426730_P001
Poaceae	Zoysia japonica	7	nbis-gene-18107, nbis-gene-19191, nbis-gene-21147 ... nbis-gene-23523, nbis-gene-54950, nbis-gene-6876, nbis-gene-9431
Poaceae	Zoysia macrostachya	7	Zma_g10013, Zma_g13400, Zma_g13930, Zma_g16204, Zma_g20059 ... Zma_g26502, Zma_g27765
Portulacaceae	Portulaca oleracea	6	evm.TU.LG02.2183, evm.TU.LG05.473, evm.TU.LG10.59 ... evm.TU.LG17.53, evm.TU.LG23.418, evm.TU.LG25.847
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g33360, gene.Posoc02g16740
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_12_RagTag.381, evm.TU.Scaffold_12_RagTag.418 ... evm.TU.Scaffold_13_RagTag.659
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-24329, nbisL1-mrna-24361, nbisL1-mrna-24440 ... nbisL1-mrna-30410
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-20582, nbisL1-mrna-2198, nbisL1-mrna-2372
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-16043, nbisL1-mrna-19647, nbisL1-mrna-19681
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000015l.373, evm.TU.utg000027l.317 ... evm.TU.utg000027l.341
Rhizophoraceae	Kandelia obovata	3	Maker00015840, Maker00017906, Maker00017953
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-4297, nbisL1-mrna-5644, nbisL1-mrna-5668
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-11869, nbisL1-mrna-11902, nbisL1-mrna-15130
Salicaceae	Populus euphratica	5	populus_peu08362, populus_peu14547, populus_peu16995 ... populus_peu18555, populus_peu35476
Solanaceae	Lycium barbarum	4	gene-LOC132600402, gene-LOC132605972, gene-LOC132606573 ... gene-LOC132611282
Solanaceae	Solanum chilense	4	SOLCI004279400, SOLCI006902500, SOLCI006963600 ... SOLCI007448100
Solanaceae	Solanum pennellii	4	gene-LOC107003300, gene-LOC107021614, gene-LOC107021998 ... gene-LOC107023842
Tamaricaceae	Reaumuria soongarica	2	STRG.24173_chr05_-, gene_3045
Tamaricaceae	Tamarix chinensis	2	TC01G4500, TC11G2388
Zosteraceae	Zostera marina	3	Zosma01g19340.v3.1, Zosma03g14220.v3.1, Zosma04g26120.v3.1