Basic Information
Locus ID:
CQ.Regalona.r1.2AG0000610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2A | 1208917 | 1216551 | + | CQ.Regalona.r1.2AG0000610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 164,643.08 Da | 38.26 | 93.72 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 832 | 1010 | 9.2E-17 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 137 | 370 | 3.5E-23 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1265 | 1360 | 9.0E-8 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 455 | 714 | 2.7E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 121 | 386 | 3.01E-41 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1243 | 1430 | 4.78E-23 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 449 | 727 | 6.07E-37 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 804 | 1076 | 2.39E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1220 | 1429 | 3.5E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 434 | 513 | 2.5E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 391 | 2.9E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 764 | 868 | 1.9E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 873 | 1080 | 8.0E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 515 | 727 | 6.6E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 175 | 3.9E-6 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 378 | 22.053999 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1230 | 1440 | 9.347534 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 418 | 728 | 20.513393 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 785 | 1072 | 18.774912 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57700.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021762094.1 | uncharacterized protein LOC110726887 isoform X1 [Chenopodium quinoa] | 0 |
| Q9SVY5 | Serine/threonine-protein kinase ZRK1 OS=Arabidopsis thaliana OX=3702 GN=ZRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8BEL4 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g044960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah031726 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl54871 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013396 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.2AG0000610, CQ.Regalona.r1.2BG0001920 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30082680 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0421 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.538, evm.TU.Scaffold_15_RagTag.541 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26696 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15826, nbisL1-mrna-15827 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.269 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002464, Maker00002536, Maker00002600 |