Basic Information
Locus ID:
CQ.Regalona.r1.1BG0021620
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 77886057 | 77887233 | - | CQ.Regalona.r1.1BG0021620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 42,582.89 Da | 60.00 | 92.42 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010667193.1 | uncharacterized protein LOC104884266 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0J8B1Y8 | RING-type domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_012910 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17899 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034786 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030790 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000020651 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0021620, CQ.Regalona.r1.2AG0023350 |