Basic Information
Locus ID:
CQ.Regalona.r1.1BG0021230
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 77410391 | 77415924 | - | CQ.Regalona.r1.1BG0021230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 52,910.40 Da | 46.62 | 60.58 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 247 | 331 | 2.0E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 398 | - | - |
| Coils | Coil | Coil | 255 | 292 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021769346.1 | protein WVD2-like 6 isoform X1 [Chenopodium quinoa] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RF06 | TPX2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology