Basic Information
Locus ID:
CQ.Regalona.r1.1BG0021210
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 77388680 | 77393036 | + | CQ.Regalona.r1.1BG0021210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 68,194.58 Da | 38.48 | 105.42 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 557 | 577 | 0.21 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 261 | 284 | 0.73 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 531 | 552 | 0.079 | IPR001611 |
| Pfam | PF12937 | F-box-like | 69 | 102 | 5.7E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 234 | 257 | 5.8E-4 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 337 | 582 | 9.03E-38 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 161 | 435 | 1.77E-30 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 104 | 4.97E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 248 | 436 | 8.4E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 502 | 595 | 2.7E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 247 | 1.6E-23 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 59 | 110 | 2.6E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 443 | 501 | 1.2E-7 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 235 | 260 | 0.23 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 341 | 366 | 0.05 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 555 | 579 | 0.0013 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 393 | 418 | 28.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 502 | 527 | 2.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 529 | 554 | 3.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 209 | 234 | 1.2E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 261 | 286 | 6.5E-4 | IPR006553 |
| SMART | SM00256 | fbox_2 | 70 | 111 | 0.0031 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 473 | 498 | 2.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 183 | 208 | 4.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 447 | 472 | 3.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 367 | 392 | 0.016 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021769345.1 | EIN3-binding F-box protein 1-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RGU6 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology