Basic Information
Locus ID:
CQ.Regalona.r1.1BG0019310
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 75099826 | 75117371 | + | CQ.Regalona.r1.1BG0019310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 70,506.14 Da | 35.26 | 99.27 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 338 | 600 | 3.32151E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 333 | 595 | 4.7E-49 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 125 | 9.07E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 604 | 1.08E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 408 | 618 | 2.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 306 | 407 | 4.3E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 137 | 3.2E-12 | IPR032675 |
| SMART | SM00220 | serkin_6 | 332 | 601 | 1.4E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 332 | 601 | 39.792168 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 452 | 464 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 338 | 360 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021866979.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Spinacia oleracea] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M3M9 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology