Basic Information
Locus ID:
CQ.Regalona.r1.1BG0010840
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 62866212 | 62867666 | + | CQ.Regalona.r1.1BG0010840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 54,478.68 Da | 45.81 | 82.00 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 29 | 185 | 5.4E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 264 | 2.46E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 183 | 3.5E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 105 | 2.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 290 | 2.6E-5 | - |
| SMART | SM00220 | serkin_6 | 25 | 264 | 2.9E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 264 | 23.311926 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 470 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64630.1 | with no lysine (K) kinase 10. | 0 |
| RefSeq | XP_021737473.1 | probable serine/threonine-protein kinase WNK5 [Chenopodium quinoa] | 0 |
| Q8RXE5 | Probable serine/threonine-protein kinase WNK10 OS=Arabidopsis thaliana OX=3702 GN=WNK10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803NEQ0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 6 | CQ.Regalona.r1.1AG0015140, CQ.Regalona.r1.1AG0015190 ... |