Basic Information
Locus ID:
CQ.Regalona.r1.1BG0010280
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 60650025 | 60654696 | + | CQ.Regalona.r1.1BG0010280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 74,034.07 Da | 43.98 | 92.93 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 382 | 640 | 5.3E-42 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 29 | 185 | 3.9E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 261 | 5.93E-41 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 650 | 4.59E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 289 | 1.2E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 646 | 2.8E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 461 | 4.4E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 105 | 1.8E-25 | - |
| SMART | SM00220 | serkin_6 | 25 | 262 | 1.4E-16 | IPR000719 |
| SMART | SM00220 | serkin_6 | 379 | 640 | 4.3E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 262 | 21.417969 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 640 | 33.799355 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 508 | 520 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41990.1 | with no lysine (K) kinase 8. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase. | 0 |
| RefSeq | XP_021737603.1 | probable serine/threonine-protein kinase WNK10 [Chenopodium quinoa] | 0 |
| Q944Q0 | Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana OX=3702 GN=WNK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MTB5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 6 | CQ.Regalona.r1.1AG0015140, CQ.Regalona.r1.1AG0015190 ... |