HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.1BG0009900
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
Chromosome Start End Strand ID
chr1B 59513028 59517487 + CQ.Regalona.r1.1BG0009900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.57 30,773.83 Da 40.06 69.82 -0.50
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03101 FAR1 DNA-binding domain 60 156 3.1E-10 IPR004330
KEGG Pathway
KO Term:
K17604 (zinc finger SWIM domain-containing protein 3)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G80010.1 FAR1-related sequence 8. 0
RefSeq XP_021775086.1 protein FAR1-RELATED SEQUENCE 8-like [Chenopodium quinoa] 0
Swiss-Prot Q9S793 Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2 0
TrEMBL A0A803MZF3 Protein FAR1-RELATED SEQUENCE OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.1BG0009900, CQ.Regalona.r1.2BG0009240 ...
CQ.Regalona.r1.4AG0016650, CQ.Regalona.r1.5AG0011170, CQ.Regalona.r1.8BG0012670, CQ.Regalona.r1.9AG0018940
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.