Basic Information
Locus ID:
CQ.Regalona.r1.1BG0003320
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 8329796 | 8331802 | - | CQ.Regalona.r1.1BG0003320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 35,202.99 Da | 32.71 | 92.83 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 4 | 173 | 3.45344E-69 | - |
| Pfam | PF00190 | Cupin | 199 | 286 | 1.2E-12 | IPR006045 |
| Pfam | PF00190 | Cupin | 11 | 152 | 1.7E-27 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 311 | 7.13E-38 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 289 | 1.6E-26 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 194 | 1.6E-32 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 195 | 305 | 9.8E-4 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 7.8E-29 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 7.3E-6 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 7.3E-6 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 7.3E-6 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021755284.1 | 11S globulin seed storage protein 2-like [Chenopodium quinoa] | 0 |
| Q8GZP6 | 11S globulin seed storage protein Ana o 2.0101 (Fragment) OS=Anacardium occidentale OX=171929 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M5Y3 | 11-S seed storage protein, plant OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology