Basic Information
Locus ID:
CQ.Regalona.r1.1BG0002150
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the mannose-6-phosphate isomerase type 1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1B | 4841916 | 4850850 | + | CQ.Regalona.r1.1BG0002150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 24,556.63 Da | 50.53 | 88.08 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01238 | Phosphomannose isomerase type I | 8 | 47 | 3.8E-9 | IPR001250 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 8 | 59 | 1.1E-9 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 3 | 48 | 4.5E-5 | IPR014710 |
| PRINTS | PR00714 | Phosphomannose isomerase type I signature | 31 | 50 | 9.6E-8 | IPR016305 |
| PRINTS | PR00714 | Phosphomannose isomerase type I signature | 12 | 31 | 9.6E-8 | IPR016305 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 203 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00051 (Fructose and mannose metabolism)
map00051 (Fructose and mannose metabolism)
ko00520 (Amino sugar and nucleotide sugar metabolism)
map00520 (Amino sugar and nucleotide sugar metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76110.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain. | 0 |
| RefSeq | XP_021737119.1 | high mobility group B protein 9-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9SGS2 | High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MX17 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology