Basic Information
Locus ID:
CQ.Regalona.r1.1AG0022910
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 60473493 | 60482025 | + | CQ.Regalona.r1.1AG0022910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 56,589.49 Da | 45.23 | 97.73 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 402 | 477 | 3.3E-12 | IPR027470 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 289 | 364 | 3.3E-12 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 94 | 283 | 6.8E-31 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 288 | 364 | 8.24E-16 | IPR036837 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 401 | 477 | 8.24E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 86 | 285 | 5.36E-42 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 89 | 283 | 1.8E-42 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 400 | 478 | 7.4E-16 | IPR036837 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 287 | 365 | 7.4E-16 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 91 | 364 | 2.7E-33 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16310.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_021749990.1 | metal tolerance protein 10-like isoform X2 [Chenopodium quinoa] | 0 |
| Q0WU02 | Metal tolerance protein 10 OS=Arabidopsis thaliana OX=3702 GN=MTP10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803NE28 | ZT_dimer domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology