Basic Information
Locus ID:
CQ.Regalona.r1.1AG0022030
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 58703623 | 58707781 | + | CQ.Regalona.r1.1AG0022030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 78,996.38 Da | 37.53 | 89.23 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 380 | 646 | 4.28527E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 375 | 578 | 5.8E-45 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 152 | 253 | 2.7E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 26 | 122 | 4.5E-7 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 645 | 9.04E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 655 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 352 | 449 | 1.0E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 19 | 123 | 8.0E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 137 | 255 | 2.8E-19 | IPR038408 |
| SMART | SM00220 | serkin_6 | 374 | 620 | 7.7E-32 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 20 | 128 | 14.542648 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 255 | 15.692266 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 374 | 624 | 35.551968 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 495 | 507 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 380 | 402 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021756548.1 | cysteine-rich receptor-like protein kinase 27 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LIS2 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_8411, gene_8412, gene_8413 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39968, Sbi_jg55298 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg14367, Seu_jg14368 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000035541, gene:ENSEOMG00000049013 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0022010, CQ.Regalona.r1.1AG0022030 |