Basic Information
Locus ID:
CQ.Regalona.r1.1AG0022010
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 58655421 | 58659598 | - | CQ.Regalona.r1.1AG0022010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 95,534.33 Da | 37.03 | 91.61 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 514 | 784 | 3.55899E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 509 | 739 | 6.2E-44 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 61 | 172 | 2.36E-12 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 491 | 802 | 2.83E-78 | IPR011009 |
| Gene3D | G3DSA:2.90.10.30 | - | 25 | 141 | 2.4E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 468 | 588 | 6.8E-32 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 142 | 251 | 1.1E-5 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 790 | 7.3E-58 | - |
| SMART | SM00108 | blect_4 | 33 | 142 | 9.9E-5 | IPR001480 |
| SMART | SM00220 | serkin_6 | 508 | 745 | 5.6E-29 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 838 | 4.2E-182 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 174 | 8.20801 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 508 | 791 | 36.68269 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 634 | 646 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65800.1 | receptor kinase 2. encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures. | 0 |
| RefSeq | XP_021756550.1 | putative receptor-like protein kinase At4g00960 isoform X1 [Chenopodium quinoa] | 0 |
| Q25AG2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LIS5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_8411, gene_8412, gene_8413 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg39968, Sbi_jg55298 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg14367, Seu_jg14368 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000035541, gene:ENSEOMG00000049013 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0022010, CQ.Regalona.r1.1AG0022030 |