Basic Information
Locus ID:
CQ.Regalona.r1.1AG0021270
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 56831654 | 56836315 | - | CQ.Regalona.r1.1AG0021270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 107,208.48 Da | 30.63 | 105.54 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 267 | 326 | 4.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 694 | 968 | 7.0E-44 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 3.3E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 180 | 2.4E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 448 | 1.41E-71 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 362 | 616 | 9.69E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 689 | 968 | 7.82E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 227 | 5.6E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 456 | 539 | 1.3E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 770 | 976 | 2.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 540 | 614 | 3.4E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 138 | 1.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 455 | 1.8E-68 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 769 | 1.6E-24 | - |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 168 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 143 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 480 | 504 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 289 | 44.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 968 | 1.9E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 969 | 37.657936 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 814 | 826 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755952.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology