Basic Information
Locus ID:
CQ.Regalona.r1.1AG0015280
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 18840344 | 18841207 | + | CQ.Regalona.r1.1AG0015280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 32,405.66 Da | 41.85 | 86.27 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 248 | 2.5E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 266 | 2.97E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 74 | 2.0E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 76 | 255 | 5.2E-42 | - |
| PIRSF | PIRSF000654 | ILK | 4 | 250 | 1.3E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 250 | 35.438896 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18750.4 | - | 0 |
| RefSeq | XP_021771473.1 | probable serine/threonine-protein kinase WNK6 [Chenopodium quinoa] | 0 |
| Q8S8Y8 | Probable serine/threonine-protein kinase WNK6 OS=Arabidopsis thaliana OX=3702 GN=WNK6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MT62 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0015280, CQ.Regalona.r1.1BG0010600 |