Basic Information
Locus ID:
CQ.Regalona.r1.1AG0015090
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
protein kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 18524567 | 18525352 | - | CQ.Regalona.r1.1AG0015090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 29,779.32 Da | 32.25 | 80.69 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 26 | 241 | 1.1E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 252 | 1.2E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 259 | 4.0E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 105 | 3.6E-26 | - |
| SMART | SM00220 | serkin_6 | 23 | 259 | 1.1E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 261 | 36.894699 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G28080.2 | Protein kinase superfamily protein. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. | 0 |
| RefSeq | XP_021771484.1 | probable serine/threonine-protein kinase WNK6 [Chenopodium quinoa] | 0 |
| Q2RA93 | Probable serine/threonine-protein kinase WNK6 OS=Oryza sativa subsp. japonica OX=39947 GN=WNK6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803NEQ1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah024112 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1AG0015090, CQ.Regalona.r1.1AG0015150 ... |