Basic Information
Locus ID:
CQ.Regalona.r1.1AG0013890
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 16006070 | 16038861 | + | CQ.Regalona.r1.1AG0013890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 158,160.36 Da | 36.43 | 88.71 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 545 | 806 | 3.32544E-91 | - |
| CDD | cd01098 | PAN_AP_plant | 1072 | 1156 | 2.74178E-12 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 543 | 804 | 8.1E-47 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 279 | 463 | 1.1E-39 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 1206 | 1404 | 1.5E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 247 | 5.1E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1185 | 1407 | 1.21E-61 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 523 | 806 | 8.9E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 813 | 6.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 511 | 613 | 7.2E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 267 | 9.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1189 | 1284 | 2.6E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1285 | 1428 | 9.2E-40 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 279 | 467 | 7.2E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 131 | 5.4E-36 | IPR032675 |
| SMART | SM00220 | serkin_6 | 1206 | 1431 | 5.8E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 539 | 806 | 2.7E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1206 | 1431 | 33.17746 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 539 | 812 | 37.657936 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1327 | 1339 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 545 | 566 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 658 | 670 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021771655.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Chenopodium quinoa] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LHQ1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology