Basic Information
Locus ID:
CQ.Regalona.r1.1AG0003980
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 4232736 | 4234494 | + | CQ.Regalona.r1.1AG0003980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 50,538.62 Da | 42.67 | 83.15 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04873 | ACT_UUR-ACR-like | 404 | 457 | 3.11264E-4 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 285 | 330 | 1.6E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 23 | 202 | 6.1E-41 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 284 | 352 | 2.49E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 277 | 347 | 2.5E-16 | IPR036638 |
| SMART | SM00353 | finulus | 287 | 336 | 5.7E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 281 | 330 | 16.329359 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 280 | - | - |
| Coils | Coil | Coil | 320 | 347 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021767200.1 | transcription factor MYC2-like [Chenopodium quinoa] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M360 | BHLH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology