Basic Information
Locus ID:
CQ.Regalona.r1.1AG0001380
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 1468847 | 1471325 | + | CQ.Regalona.r1.1AG0001380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 83,748.85 Da | 43.32 | 85.61 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 467 | 747 | 2.57E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 462 | 742 | 7.0E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 440 | 746 | 7.96E-72 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 122 | 301 | 5.23E-17 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 65 | 314 | 2.7E-20 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 547 | 754 | 2.3E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 428 | 546 | 3.8E-28 | - |
| SMART | SM00220 | serkin_6 | 461 | 753 | 3.4E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 758 | 36.597885 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 593 | 605 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 467 | 489 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_021760401.1 | serine/threonine-protein kinase-like protein CCR4 [Chenopodium quinoa] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M511 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology