Basic Information
Locus ID:
CQ.Regalona.r1.1AG0000540
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the glycosyltransferase 31 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1A | 554464 | 564267 | - | CQ.Regalona.r1.1AG0000540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 96,607.35 Da | 46.80 | 73.68 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13334 | Domain of unknown function (DUF4094) | 11 | 87 | 6.3E-19 | IPR025298 |
| Pfam | PF18151 | Domain of unknown function (DUF5601) | 380 | 439 | 7.5E-15 | IPR041545 |
| Pfam | PF02204 | Vacuolar sorting protein 9 (VPS9) domain | 486 | 589 | 4.4E-32 | IPR003123 |
| Pfam | PF01762 | Galactosyltransferase | 124 | 320 | 2.9E-46 | IPR002659 |
| SUPERFAMILY | SSF109993 | VPS9 domain | 367 | 605 | 9.55E-64 | IPR037191 |
| Gene3D | G3DSA:3.90.550.50 | - | 101 | 326 | 5.5E-16 | - |
| Gene3D | G3DSA:1.20.1050.80 | VPS9 domain | 447 | 613 | 1.2E-65 | IPR037191 |
| Gene3D | G3DSA:1.10.246.120 | - | 376 | 445 | 4.3E-21 | - |
| SMART | SM00167 | vps9_2 | 483 | 602 | 5.4E-33 | IPR003123 |
| ProSiteProfiles | PS51205 | VPS9 domain profile. | 450 | 594 | 43.388943 | IPR003123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 770 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 765 | 859 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 808 | 847 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77810.2 | Galactosyltransferase family protein. | 0 |
| RefSeq | XP_021760486.1 | vacuolar protein sorting-associated protein 9A-like isoform X1 [Chenopodium quinoa] | 0 |
| Q6NQB7 | Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=B3GALT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4Y1QV53 | Vacuolar sorting protein 9 domain-containing protein OS=Prunus dulcis OX=3755 GN=Prudu_004302 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology