Basic Information
Locus ID:
COCNU_16G006800
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 33567651 | 33570115 | - | COCNU_16G006800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 78,462.82 Da | 48.02 | 87.58 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 397 | 678 | 8.4059E-89 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 33 | 264 | 2.71749E-81 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 34 | 265 | 1.9E-51 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 392 | 605 | 3.9E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 373 | 708 | 1.91E-77 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 268 | 1.91E-57 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 31 | 272 | 6.3E-60 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 474 | 693 | 1.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 352 | 473 | 3.4E-28 | - |
| SMART | SM00220 | serkin_6 | 391 | 686 | 1.5E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 391 | 687 | 37.629669 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 518 | 530 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 147 | 153 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 397 | 420 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 299 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_029123945.1 | L-type lectin-domain containing receptor kinase VIII.1 [Elaeis guineensis] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0NEK9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Cocos nucifera OX=13894 GN=COCNU_16G006800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology