Basic Information
Locus ID:
COCNU_16G006680
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 33376354 | 33379011 | - | COCNU_16G006680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 83,091.05 Da | 46.75 | 78.36 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 488 | 764 | 1.20884E-89 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 191 | 219 | 4.1E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 483 | 695 | 2.4E-42 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 34 | 298 | 1.23E-24 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 763 | 1.24E-70 | IPR011009 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 349 | 359 | 3.14E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 778 | 8.0E-49 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 187 | 429 | 1.8E-21 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 24 | 186 | 1.4E-7 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 444 | 562 | 7.3E-34 | - |
| SMART | SM00220 | serkin_6 | 482 | 767 | 1.5E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 482 | 756 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 488 | 510 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 610 | 622 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 460 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_010937847.1 | putative serine/threonine-protein kinase-like protein CCR3 [Elaeis guineensis] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IYZ0 | Serine/threonine-protein kinase-like protein CCR3 OS=Cocos nucifera OX=13894 GN=COCNU_16G006680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology