Basic Information
Locus ID:
COCNU_16G006260
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 32581908 | 32589397 | + | COCNU_16G006260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 117,882.21 Da | 35.93 | 89.47 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01491 | Ube1_repeat1 | 73 | 458 | 2.61556E-141 | - |
| CDD | cd01490 | Ube1_repeat2 | 490 | 1015 | 0.0 | - |
| Pfam | PF09358 | Ubiquitin fold domain | 968 | 1057 | 1.9E-21 | IPR018965 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 248 | 319 | 5.4E-23 | IPR032418 |
| Pfam | PF00899 | ThiF family | 471 | 958 | 7.3E-73 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 658 | 897 | 1.0E-66 | IPR019572 |
| Pfam | PF00899 | ThiF family | 75 | 450 | 1.5E-25 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 320 | 389 | 1.5E-21 | IPR032420 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 467 | 952 | 7.16E-122 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 68 | 455 | 4.84E-94 | IPR035985 |
| Gene3D | G3DSA:3.50.50.80 | - | 64 | 182 | 1.2E-35 | IPR042449 |
| Gene3D | G3DSA:3.10.290.60 | - | 970 | 1060 | 1.2E-19 | IPR038252 |
| Gene3D | G3DSA:1.10.10.2660 | - | 643 | 904 | 1.3E-175 | IPR042063 |
| Gene3D | G3DSA:3.40.50.720 | - | 491 | 955 | 1.3E-175 | - |
| Gene3D | G3DSA:3.40.50.12550 | - | 193 | 481 | 1.9E-103 | - |
| Gene3D | G3DSA:2.40.30.180 | - | 236 | 317 | 1.9E-103 | IPR042302 |
| SMART | SM00985 | UBA_e1_C_a_2 | 935 | 1057 | 2.4E-46 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 68 | 1062 | 0.0 | IPR018075 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 650 | 658 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 518 | 541 | 8.6E-51 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 565 | 590 | 8.6E-51 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 210 | 237 | 8.6E-51 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 95 | 119 | 8.6E-51 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_010937921.1 | ubiquitin-activating enzyme E1 1 isoform X1 [Elaeis guineensis] | 0 |
| P20973 | Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum OX=4565 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IZX1 | Ubiquitin-activating enzyme E1 1 OS=Cocos nucifera OX=13894 GN=COCNU_16G006260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology