Basic Information
Locus ID:
COCNU_16G004870
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 29403790 | 29412399 | - | COCNU_16G004870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 72,953.50 Da | 47.48 | 88.95 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 167 | 608 | 5.7E-218 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 167 | 600 | 4.33E-55 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 192 | 600 | 1.1E-13 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 51 | - | - |
| Coils | Coil | Coil | 110 | 130 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 0 |
| RefSeq | XP_010938195.1 | neutral/alkaline invertase 1, mitochondrial [Elaeis guineensis] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IYD5 | Alkaline/neutral invertase OS=Cocos nucifera OX=13894 GN=COCNU_16G004870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology