Basic Information
Locus ID:
COCNU_16G003640
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
BCE2
Description:
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 26683771 | 26703809 | + | COCNU_16G003640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 65,155.38 Da | 47.54 | 92.02 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06850 | biotinyl_domain | 86 | 157 | 2.34823E-8 | - |
| CDD | cd06849 | lipoyl_domain | 42 | 107 | 1.61762E-22 | - |
| Pfam | PF00198 | 2-oxoacid dehydrogenases acyltransferase (catalytic domain) | 284 | 395 | 9.5E-37 | IPR001078 |
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 403 | 588 | 4.6E-93 | IPR021131 |
| Pfam | PF00364 | Biotin-requiring enzyme | 43 | 107 | 1.5E-14 | IPR000089 |
| Pfam | PF02817 | e3 binding domain | 199 | 234 | 4.9E-14 | IPR004167 |
| SUPERFAMILY | SSF52777 | CoA-dependent acyltransferases | 284 | 396 | 2.71E-34 | - |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 421 | 540 | 3.01E-25 | IPR036227 |
| SUPERFAMILY | SSF47005 | Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 198 | 238 | 3.01E-11 | IPR036625 |
| SUPERFAMILY | SSF51230 | Single hybrid motif | 41 | 107 | 6.81E-18 | IPR011053 |
| SUPERFAMILY | SSF51230 | Single hybrid motif | 107 | 168 | 5.5E-14 | IPR011053 |
| Gene3D | G3DSA:3.100.10.10 | - | 403 | 588 | 1.6E-96 | - |
| Gene3D | G3DSA:4.10.320.10 | - | 197 | 246 | 2.4E-15 | IPR036625 |
| Gene3D | G3DSA:2.40.50.100 | - | 107 | 160 | 6.2E-15 | - |
| Gene3D | G3DSA:3.30.559.10 | - | 274 | 402 | 4.0E-38 | IPR023213 |
| Gene3D | G3DSA:2.40.50.100 | - | 41 | 106 | 5.2E-20 | - |
| ProSiteProfiles | PS51826 | Peripheral subunit-binding (PSBD) domain profile. | 200 | 237 | 18.596773 | IPR004167 |
| ProSiteProfiles | PS50968 | Biotinyl/lipoyl domain profile. | 41 | 121 | 24.092571 | IPR000089 |
| ProSitePatterns | PS00189 | 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. | 108 | 137 | - | IPR003016 |
| ProSitePatterns | PS00189 | 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. | 66 | 95 | - | IPR003016 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
ko00280 (Valine, leucine and isoleucine degradation)
map00280 (Valine, leucine and isoleucine degradation)
ko00640 (Propanoate metabolism)
map00640 (Propanoate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02662 (2-Methylpropanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylpropanoyl)dihydrolipoyllysine)
R03174 ((S)-2-Methylbutanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(2-methylbutanoyl)dihydrolipoyllysine)
R04097 (3-Methylbutanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] S-(3-methylbutanoyl)dihydrolipoyllysine)
R10998 (Propanoyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + Enzyme N6-(S-propyldihydrolipoyl)lysine)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_010938375.1 | lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial isoform X1 [Elaeis guineensis] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0NDH1 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex OS=Cocos nucifera OX=13894 GN=COCNU_16G003640 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology