halophFGD

Basic Information

Locus ID: COCNU_16G000340

Species & Taxonomic ID: Cocos nucifera & 13894

Genome Assembly: GCA_008124465.1

Description: Calcium calmodulin-dependent serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr16	8657669	8659657	+	COCNU_16G000340

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.93	20,489.54 Da	46.69	99.17	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF47473	EF-hand	20	170	1.65E-18	IPR011992
Gene3D	G3DSA:1.10.238.10	-	8	171	8.9E-15	-
ProSiteProfiles	PS50222	EF-hand calcium-binding domain profile.	31	66	9.352757	IPR002048

Gene Ontology

Molecular Function:

GO:0005509 (calcium ion binding)

KEGG Pathway

KO Term:

K00924 (receptor protein kinase TMK [EC:2.7.11.1])

Best hit

Source	Best Hit ID	Description
TAIR	AT2G41140.1	CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1).
RefSeq	XP_010907987.1	calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Elaeis guineensis]
Swiss-Prot	O80673	CDPK-related kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRK1 PE=1 SV=1
TrEMBL	A0A8K0ND50	Putative CDPK-related kinase 1 OS=Cocos nucifera OX=13894 GN=COCNU_16G000340 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000032068
Anacardiaceae	Pistacia vera	1	pistato.v30165530
Arecaceae	Cocos nucifera	4	COCNU_01G016240, COCNU_10G004470, COCNU_16G000340 ... contig69182461G000010
Asparagaceae	Asparagus officinalis	2	AsparagusV1_02.1961.V1.1, AsparagusV1_08.550.V1.1
Asteraceae	Flaveria trinervia	1	Ftri8G26530
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno15g03480
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0084940.1, HORVU.MOREX.r3.3HG0283610.1
Poaceae	Zea mays	3	Zm00001eb093950_P001, Zm00001eb145760_P001 ... Zm00001eb170980_P002
Poaceae	Zoysia japonica	2	nbis-gene-34372, nbis-gene-45412
Portulacaceae	Portulaca oleracea	1	evm.TU.LG02.1200
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-799
Zosteraceae	Zostera marina	2	Zosma02g23970.v3.1, Zosma05g30300.v3.1