Basic Information
Locus ID:
COCNU_15G005900
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 20824509 | 20827664 | - | COCNU_15G005900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.29 | 114,086.52 Da | 38.73 | 105.38 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 780 | 1048 | 1.81876E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 776 | 974 | 4.6E-41 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 245 | 267 | 0.083 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 5.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 5.7E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 669 | 1.09E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 754 | 1045 | 2.97E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 2.8E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 850 | 1050 | 3.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 736 | 849 | 6.7E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 418 | 688 | 9.7E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 281 | 4.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 412 | 8.9E-23 | IPR032675 |
| SMART | SM00220 | serkin_6 | 774 | 1046 | 1.9E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 8.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 121 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 644 | 666 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 21.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 774 | 1048 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 780 | 802 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 894 | 906 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_008797123.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Phoenix dactylifera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0ND18 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Cocos nucifera OX=13894 GN=COCNU_15G005900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology