Basic Information
Locus ID:
COCNU_14G012130
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 53173805 | 53178610 | - | COCNU_14G012130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 61,545.46 Da | 33.39 | 80.00 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 375 | 434 | 2.24436E-16 | IPR002048 |
| CDD | cd00051 | EFh | 447 | 509 | 5.56202E-17 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 55 | 327 | 7.70598E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 56 | 328 | 7.4E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 375 | 434 | 2.1E-8 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 446 | 509 | 1.2E-13 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 357 | 532 | 2.75E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 350 | 1.75E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 141 | 3.5E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 338 | 511 | 5.6E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 337 | 9.6E-59 | - |
| SMART | SM00220 | serkin_6 | 56 | 328 | 7.3E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 447 | 475 | 0.065 | IPR002048 |
| SMART | SM00054 | efh_1 | 375 | 403 | 1.0E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 411 | 439 | 1.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 483 | 511 | 9.4E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 371 | 406 | 16.521873 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 479 | 514 | 14.039183 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 328 | 48.965134 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 407 | 442 | 8.822743 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 443 | 478 | 12.811786 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 384 | 396 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 456 | 468 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 420 | 432 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 85 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 492 | 504 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_010923436.1 | calcium-dependent protein kinase 20 isoform X1 [Elaeis guineensis] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IW72 | Calcium-dependent protein kinase 20 OS=Cocos nucifera OX=13894 GN=COCNU_14G012130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology