Basic Information
Locus ID:
COCNU_14G011170
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 50661410 | 50668350 | + | COCNU_14G011170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 121,376.93 Da | 42.99 | 97.94 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 847 | 1115 | 5.78322E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 79 | 6.6E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 300 | 322 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 578 | 638 | 6.0E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 157 | 174 | 1.9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 844 | 1040 | 1.2E-41 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 252 | 274 | 0.27 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 179 | 238 | 5.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 650 | 710 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 820 | 1112 | 8.9E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 147 | 715 | 9.86E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 917 | 1117 | 2.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 112 | 9.4E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 497 | 744 | 2.7E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 802 | 916 | 8.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 345 | 3.1E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 346 | 473 | 5.7E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 673 | 696 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 178 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 649 | 672 | 42.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 225 | 249 | 8.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 624 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 224 | 320.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 841 | 1118 | 5.2E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 625 | 648 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 841 | 1120 | 39.043068 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 651 | 674 | 7.041994 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 961 | 973 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 847 | 869 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 649 | 662 | 2.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 204 | 217 | 2.3E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 770 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010923619.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Elaeis guineensis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0NCM1 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Cocos nucifera OX=13894 GN=COCNU_14G011170 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology