Basic Information
Locus ID:
COCNU_14G008760
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
amino acid
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 39217610 | 39233931 | + | COCNU_14G008760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 66,601.01 Da | 28.39 | 105.86 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 77 | 477 | 1.2E-41 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 516 | 566 | 4.8E-18 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 71 | 509 | 2.1E-92 | - |
| PIRSF | PIRSF006060 | AA_transporter | 54 | 515 | 2.3E-66 | - |
| PIRSF | PIRSF006060 | AA_transporter | 461 | 584 | 28.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 611 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_010923711.1 | cationic amino acid transporter 1-like [Elaeis guineensis] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IVS3 | Cationic amino acid transporter 1-like OS=Cocos nucifera OX=13894 GN=COCNU_14G008760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology