halophFGD

Basic Information

Locus ID: COCNU_14G007100

Species & Taxonomic ID: Cocos nucifera & 13894

Genome Assembly: GCA_008124465.1

Description: acetyltransferase component of pyruvate dehydrogenase complex

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr14	21094348	21098495	+	COCNU_14G007100

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.64	20,622.40 Da	72.23	94.67	0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06849	lipoyl_domain	20	59	4.19299E-8	-
Pfam	PF00364	Biotin-requiring enzyme	20	59	2.0E-5	IPR000089
SUPERFAMILY	SSF51230	Single hybrid motif	19	79	4.45E-9	IPR011053
Gene3D	G3DSA:2.40.50.100	-	17	85	2.8E-8	-

KEGG Pathway

KO Term:

K00627 (pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12])

Pathway:

ko00010 (Glycolysis / Gluconeogenesis) map00010 (Glycolysis / Gluconeogenesis) ko00020 (Citrate cycle (TCA cycle)) map00020 (Citrate cycle (TCA cycle)) ko00620 (Pyruvate metabolism) map00620 (Pyruvate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01200 (Carbon metabolism) map01200 (Carbon metabolism)

Module:

M00307 (Pyruvate oxidation, pyruvate => acetyl-CoA)

Reaction:

R00209 (Pyruvate + CoA + NAD+ <=> Acetyl-CoA + CO2 + NADH + H+) R02569 (Acetyl-CoA + Enzyme N6-(dihydrolipoyl)lysine <=> CoA + [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G34430.1	2-oxoacid dehydrogenases acyltransferase family protein.
RefSeq	XP_008781631.2	dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic-like [Phoenix dactylifera]
Swiss-Prot	Q9C8P0	Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB3003 PE=2 SV=1
TrEMBL	A0A8K0IV39	Lipoyl-binding domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_14G007100 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000013134
Arecaceae	Cocos nucifera	2	COCNU_03G001150, COCNU_14G007100
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.1284.V1.1, AsparagusV1_05.1496.V1.1 ... AsparagusV1_Unassigned.673.V1.1
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g01930
Plumbaginaceae	Limonium bicolor	2	Lb1G01234, Lb2G15417
Poaceae	Sporobolus alterniflorus	1	Chr07G017130
Poaceae	Triticum dicoccoides	1	gene_TRIDC5BG020310
Portulacaceae	Portulaca oleracea	1	evm.TU.LG07.1169
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-26499