Basic Information
Locus ID:
COCNU_14G006280
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 16745237 | 16764099 | - | COCNU_14G006280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 45,938.86 Da | 43.20 | 80.05 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 170 | 253 | 1.4E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 172 | 351 | 6.06E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 294 | 337 | 3.6E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 338 | 347 | 3.6E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 169 | 264 | 1.3E-24 | - |
| SMART | SM00220 | serkin_6 | 48 | 317 | 1.5E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 275 | 12.782096 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_026663288.2 | probable serine/threonine protein kinase IRE [Phoenix dactylifera] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IV50 | Protein kinase domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_14G006280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology