Basic Information
Locus ID:
COCNU_14G003330
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
CBL04
Description:
Calcineurin B-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 8245499 | 8252667 | + | COCNU_14G003330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 18,756.01 Da | 43.25 | 83.27 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 58 | 128 | 1.9222E-9 | IPR002048 |
| Pfam | PF13202 | EF hand | 25 | 44 | 0.12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 56 | 127 | 4.9E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 24 | 153 | 2.17E-33 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 10 | 161 | 1.1E-50 | - |
| SMART | SM00054 | efh_1 | 25 | 49 | 160.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 58 | 86 | 0.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 102 | 130 | 1.2 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 54 | 89 | 12.616518 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 98 | 133 | 11.193852 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 17 | 52 | 10.356991 | IPR002048 |
| PRINTS | PR00450 | Recoverin family signature | 25 | 46 | 2.3E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 72 | 90 | 2.3E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 118 | 138 | 2.3E-10 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24270.3 | - | 0 |
| RefSeq | XP_010924507.1 | calcineurin B-like protein 7 isoform X2 [Elaeis guineensis] | 0 |
| Q3HRN9 | Calcineurin B-like protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0IUT4 | Calcineurin B-like protein OS=Cocos nucifera OX=13894 GN=COCNU_14G003330 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology