Basic Information
Locus ID:
COCNU_14G002970
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 7506373 | 7509911 | + | COCNU_14G002970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 105,461.11 Da | 43.72 | 106.11 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 140 | 199 | 2.7E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 70 | 126 | 1.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 658 | 939 | 6.5E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 1.8E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 70 | 379 | 2.59E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 641 | 942 | 3.51E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 288 | 567 | 4.39E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 180 | 286 | 2.4E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 737 | 953 | 3.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 640 | 736 | 5.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 589 | 5.6E-74 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 179 | 2.7E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 656 | 942 | 8.2E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 26.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 260 | 281 | 52.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 472 | 501 | 520.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 187 | 214 | 87.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 90 | 116 | 52.0 | - |
| SMART | SM00369 | LRR_typ_2 | 520 | 544 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 496 | 519 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 83.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 656 | 942 | 35.834648 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 793 | 805 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 662 | 687 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010910700.1 | receptor-like protein kinase HSL1 isoform X1 [Elaeis guineensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IUA9 | Receptor-like protein kinase HSL1 OS=Cocos nucifera OX=13894 GN=COCNU_14G002970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology