Basic Information
Locus ID:
COCNU_14G001980
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 5177715 | 5192586 | + | COCNU_14G001980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 93,111.09 Da | 49.71 | 91.23 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 563 | 696 | 9.15484E-25 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 565 | 695 | 2.3E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 719 | 761 | 3.4E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 525 | 764 | 3.1E-60 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 697 | 769 | 4.3E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 524 | 696 | 4.3E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 561 | 698 | 6.9E-21 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 668 | 687 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 790 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 209 | - | - |
| Coils | Coil | Coil | 757 | 777 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010924775.1 | peroxisome biosynthesis protein PAS1 isoform X1 [Elaeis guineensis] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0IUJ9 | Peroxisome biosynthesis protein PAS1 OS=Cocos nucifera OX=13894 GN=COCNU_14G001980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology