Basic Information
Locus ID:
COCNU_13G006210
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 17621802 | 17626828 | + | COCNU_13G006210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 48,125.66 Da | 51.30 | 52.38 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 252 | 308 | 2.5E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 433 | 453 | 1.0E-6 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 249 | 310 | 5.23E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 424 | 453 | 1.7E-9 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 239 | 311 | 4.5E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 419 | 453 | 4.4E-15 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 251 | 309 | 5.3E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 252 | 310 | 22.148001 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 427 | 453 | 16.351913 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 250 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_010939060.1 | probable WRKY transcription factor 3 [Elaeis guineensis] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0ITA9 | Putative WRKY transcription factor 3 OS=Cocos nucifera OX=13894 GN=COCNU_13G006210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology