Basic Information
Locus ID:
COCNU_13G005540
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 15152650 | 15155979 | + | COCNU_13G005540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 119,997.58 Da | 40.93 | 99.98 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 836 | 1104 | 3.96963E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 568 | 627 | 2.8E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 3.5E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 215 | 276 | 3.7E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 146 | 164 | 0.37 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 832 | 1029 | 6.7E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 808 | 1101 | 1.89E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 169 | 704 | 5.44E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 795 | 905 | 1.6E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 329 | 1.9E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 456 | 5.9E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 906 | 1106 | 2.7E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 476 | 730 | 8.5E-53 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 144 | 165 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 190 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 214 | 238 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 590 | 613 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 614 | 638 | 12.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 830 | 1108 | 3.4E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 662 | 685 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 287 | 311 | 19.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 404 | 426 | 7.280716 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 830 | 1109 | 37.587265 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 950 | 962 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 836 | 858 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 759 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010939183.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Elaeis guineensis] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0NBA7 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Cocos nucifera OX=13894 GN=COCNU_13G005540 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology