Basic Information
Locus ID:
COCNU_13G004870
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 12026742 | 12032129 | - | COCNU_13G004870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 109,203.36 Da | 38.23 | 97.81 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 150 | 208 | 1.2E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 579 | 599 | 0.99 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 247 | 268 | 0.19 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 695 | 910 | 6.8E-46 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 557 | 570 | 0.63 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 100 | 114 | 0.84 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 71 | 2.4E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 976 | 7.24E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 317 | 631 | 2.79E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 80 | 380 | 7.3E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 987 | 6.3E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 431 | 528 | 4.8E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 430 | 1.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 687 | 770 | 1.3E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 315 | 4.4E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 529 | 620 | 1.0E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 210 | 9.5E-44 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 245 | 269 | 8.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 532 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 976 | 8.8E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 148 | 172 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 221 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 986 | 37.700336 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 699 | 721 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_010939310.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Elaeis guineensis] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IT19 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Cocos nucifera OX=13894 GN=COCNU_13G004870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology