Basic Information
Locus ID:
COCNU_13G001740
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 4053952 | 4066695 | + | COCNU_13G001740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 205,570.09 Da | 47.11 | 75.38 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 381 | 653 | 5.08276E-131 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1543 | 1806 | 2.94082E-148 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1582 | 1748 | 9.0E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 403 | 646 | 4.2E-30 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 8.4E-18 | IPR000306 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 105 | 4.8E-20 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1541 | 1806 | 4.51E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 447 | 619 | 1.67E-41 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1667 | 1807 | 2.1E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 446 | 619 | 3.4E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1524 | 1663 | 6.6E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 113 | 4.3E-22 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1520 | 1807 | 3.4E-127 | IPR002498 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 1.7E-19 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1479 | 1806 | 56.163395 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.876189 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1253 | 1280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1818 | 1839 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010939855.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A [Elaeis guineensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IU36 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Cocos nucifera OX=13894 GN=COCNU_13G001740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology