Basic Information
Locus ID:
COCNU_13G001030
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2490043 | 2494234 | + | COCNU_13G001030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 102,232.56 Da | 34.83 | 89.91 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 609 | 881 | 4.78483E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 69 | 9.1E-6 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 339 | 374 | 6.8E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 605 | 876 | 2.0E-47 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 402 | 444 | 3.4E-7 | IPR025875 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 591 | 891 | 6.1E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 442 | 9.69E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 334 | 2.4E-71 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 564 | 680 | 1.7E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 336 | 462 | 5.8E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 681 | 894 | 2.3E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 400 | 423 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 290 | 313 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 168 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 265 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 424 | 446 | 270.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 603 | 882 | 6.3E-44 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 193 | 216 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 117 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 21.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 245 | 267 | 7.057395 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 603 | 881 | 40.357529 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 609 | 631 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 728 | 740 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 934 | 955 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010939998.1 | receptor protein kinase TMK1 [Elaeis guineensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0IST8 | Receptor protein kinase TMK1 OS=Cocos nucifera OX=13894 GN=COCNU_13G001030 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology