Basic Information
Locus ID:
COCNU_13G000880
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 2226559 | 2227263 | + | COCNU_13G000880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.49 | 5,726.62 Da | 53.38 | 97.60 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 47 | 6.3E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 48 | 8.02E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 50 | 1.4E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 50 | 11.849253 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_008782451.2 | serine/threonine/tyrosine-protein kinase HT1-like isoform X2 [Phoenix dactylifera] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0ISS6 | Putative Serine/threonine-protein kinase HT1 OS=Cocos nucifera OX=13894 GN=COCNU_13G000880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg856 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl31892, Sgl37170, Sgl37236 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000026960 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30269030 |
| Apiaceae | Apium graveolens | 1 | Ag7G01524 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G007680, COCNU_11G009900, COCNU_13G000880 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120109521 |
| Brassicaceae | Brassica nigra | 2 | BniB01g019280.2N, BniB02g022250.2N |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G05351 |
| Poaceae | Echinochloa crus-galli | 4 | AH06.3012, AH09.2786, BH05.3906, CH09.3269 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8AG0614320 |
| Poaceae | Oryza coarctata | 1 | Oco21G002550 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr0G027540 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G995800, Tel7E01G856100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG088180 |
| Poaceae | Zea mays | 1 | Zm00001eb206990_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5127 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-193 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14417 |
| Solanaceae | Solanum chilense | 2 | SOLCI007145900, SOLCI007146800 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005924, gene-LOC107027483 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G1116 |