Basic Information
Locus ID:
COCNU_12G006330
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 34486135 | 34515942 | - | COCNU_12G006330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 58,048.72 Da | 37.25 | 87.78 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00180 | PKc | 67 | 230 | 3.61004E-44 | - |
| CDD | cd13999 | STKc_MAP3K-like | 67 | 462 | 2.73327E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 462 | 2.1E-27 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 65 | 234 | 2.9E-40 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 240 | 322 | 9.2E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 233 | 7.28E-52 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 236 | 324 | 7.01E-26 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 328 | 486 | 2.02E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 235 | 327 | 7.9E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 328 | 470 | 4.3E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 61 | 234 | 1.2E-49 | - |
| SMART | SM00220 | serkin_6 | 61 | 466 | 3.8E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 466 | 40.513004 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 67 | 88 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.2 | - | 0 |
| RefSeq | XP_010931355.1 | serine/threonine-protein kinase STY13 [Elaeis guineensis] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8K0IRW1 | Putative Kinase ATN1-like protein OS=Cocos nucifera OX=13894 GN=COCNU_12G006330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology